Bioinformatics Quiz

What is the purpose of BLAST in bioinformatics?

• Protein structure prediction

• Sequence alignment

• Gene expression analysis

• Pathway mapping

Which tool is used for multiple sequence alignment?

• Bowtie

• Clustal Omega

• GATK

• FastQC

What does DESeq2 analyze?

• Protein structures

• Gene expression data

• Phylogenetic trees

• Genomic variants

Which tool is used for visualizing protein structures?

• RStudio

• STRING

• PyMOL

• Samtools

What is the main function of GATK?

• RNA-Seq normalization

• Genome assembly

• Variant discovery

• Protein domain classification

Which tool is associated with genome-wide association studies (GWAS)?

• InterPro

• MAFFT

• Cufflinks

• PLINK

What does the KEGG database focus on?

• Protein interactions

• Metabolic pathways

• Sequence alignments

• Gene annotations

Which tool is used for quality control of sequencing data?

• Haploview

• FastQC

• MrBayes

• Cytoscape

What is the primary use of the software MAFFT?

• Phylogenetic analysis

• Variant calling

• Multiple sequence alignment

• Gene expression analysis

Which tool is used for analyzing RNA-Seq data?

• Swiss-Model

• SPAdes

• EdgeR

• Bowtie