WorksheetsFinal Review Qs
Total questions: 167
Worksheet time: 3hrs 44mins
Which of the following statements regarding processing of tissues for histology is FALSE?
Tissues are visualized within sections due to their inherent differential colours.
Embedding involves infiltration of tissues with a soluble medium that hardens.
Fixation prevents tissue degradation by cytoplasmic enzymes.
Fixation crosslinks cellular proteins.
Physical examination of a 49-year-old female with history of diabetes reveals edema of lower extremities. A kidney disease was suspected and a kidney biopsy was performed for evaluation. Which of the following histochemistry stains is best to highlight the patient's carbohydrate-rich glycoproteins in the glomerular basement membrane when examined by light microscopy?
Silver Neuron Stain
Periodic Acid-Schiff stain (PAS)
Hematoxylin only
Hematoxylin & Eosin stain (H&E)
Name a component that would stain with H&E, and therefore be directly visible by light microscopy in a histological section.
Microtubules
Carbohydrates and glycoproteins
Mucus
Type I Collagen
Preparation of tissues for light or electron microscopy often involves embedding the tissues in a substance such as wax or plastic. What is the purpose of such embedding?
To ensure that the optical characteristics of the tissue are appropriate for the microscope
To help with the process of fixation of the tissue
To provide a hard medium that can be sectioned thinly with a blade
To allow the tissues to be stained with histological dyes
You are provided with a histological specimen from the fallopian tubes to demonstrate the presence of microtubules in the core of epithelial cilia. Which of the following microscopy preparations would you use to best visualize the intracellular organization of microtubules within cilia?
Transmission electron microscopy
H&E stained light microscopy
Golgi stained SEM
PAS stained light microscopy
Which of the following staining methods will clearly show changes in levels of stored glycogen in liver cells under fasting conditions?
Periodic Acid-Schiff
Hematoxylin and Eosin
Osmium Fixation
Metal stain with TEM
A 47-year old patient presents with a cancerous tumor containing cells that seem to be secreting high amounts of proteins into the surrounding tissue. A pathology resident attempting to locate the borders of the mass obtained a biopsy and prepared an H&E stained slide. Since the cancerous cells are highly secretory, which of the following features would you most likely observe in the affected cells?
Heterochromatic nucleus
Vacuolated cytoplasm
Eosinophilic cytoplasm
Basophilic cytoplasm
A 28-year old female suffered a miscarriage at 5-month gestation. She is seeking genetic counselling to understand the cause of death of her child. Histopathological studies revealed abnormally shaped cells from various tissues. EM examination show decreased density of terminal web, abnormal core of microvilli and fewer cytoskeletal tracks for myosin motor proteins. Which of the following cellular fibers is most likely affected?
Intermediate filaments
Microfilaments
Elastic fibers
Microtubules
You receive an H&E stained sample for histopathological study and notice that it consists of clusters of cells with cytoplasmic regions of both basophilia and intense eosinophilia. The nuclei are highly euchromatic and contain prominent nucleoli. Which of the following most likely describes the function of these cells?
Lipid hormone secretion
Protein secretion
Glycogen storage
Ion pumping
You receive an H&E stained sample for histopathological study and notice that it consists of clusters of cells with entirely eosinophilic cytoplasm. The nuclei are centrally located and contain both euchromatin and heterochromatin, nucleoli is not clearly distinguishable from heterochromatin. Which of the following most likely describes the function of these cells?
Secretes steroid hormones
Stored secretory proteins
Produce high amounts of mucus
Produce high amounts of ATP
Consider a cellular modification where you extend the cytoplasm to form a finger-like process. To perform its function this extension needs to be filled with a cytoskeletal fiber that is both dynamic (able to modify its length) and strong. Which cytoskeletal fiber should it contain?
Microtubules
Intermediate Filaments
Microfilaments
Actin filaments
You receive a biopsy for histopathology analysis of the pancreatic secretory cells from a patient exhibiting a wide range of digestive and metabolic symptoms. Analysis revealed abnormal appearance of the cell’s nucleoli. Which of the following functional deficits are these cells most likely to experience?
Inadequate ribosome synthesis
Normal function of rRNA
Decreased euchromatin levels
Increased protein secretion
You receive an H&E stained sample for histopathological study and notice that it consists of clusters of cells with entirely basophilic cytoplasm. You suspect that the cell’s basophilia is caused by its rER content, and thus the cell must be actively involved in protein secretion. Which mechanism of transcellular vesicular transport do these cells most likely use?
Pinocytosis
Constitutive phagocytosis
Constitutive exocytosis
Regulated exocytosis
A 5-month old baby is brought to the pediatrician after her parents noticed that she has gradually lost the ability to crawl and move. Following a series of examinations, she is diagnosed with Tay-Sachs, a type of lysosomal storage disease affecting neurons. Lysosomes in patients with this condition contain hydrolytic enzymes that are unable to breakdown glycolipids. Histopathological analysis of the affected neurons would most likely reveal:
Increased lipofuscin granule content
Decreased secondary lysosome content
Decreased residual body content
Increased glycogen content
Which of the following statements concerning PAS staining is FALSE?
It can be used to detect basement membranes
It gives a reddish-pink colour
It can be used to detect the lateral boundary of all epithelia
It can be used to detect mucus
Which of the following statements regarding the Golgi apparatus is FALSE?
It plays a role in the sorting and packaging of protein at its cis face
It does not stain well with hematoxylin or eosin
It receives proteins from the rough ER
It is composed of membrane cisternae with dilated edges
A characteristic feature of reticulocytes is that they:
Are the cells that are misshapen in sickle cell anemia
Have a large round central nucleus
Decrease in number following a hemorrhage
Have residual ribosome inclusions in the cytoplasm
A patient with disorder affecting the efficiency of megakaryocytes will be most likely presented with symptoms of:
Excessive bleeding
Multiple subcutaneous nodules in the arm and shoulder
Bacterial infections
Hypersensitivity to sun exposure
A characteristic feature of monocytes is that they:
Differentiate into macrophages
Are approximately the same size as reticulocytes
Are the most abundant type of white blood cell
Differentiate into plasma cells
Which blood cell attacks blood-borne larvae of parasites?
Basophil
Eosinophil
RBC
Monocyte
In your infectious disease sub-internship, you see a patient who has been experiencing fevers and fatigue. His white cell count comes back and you see that his neutrophil levels are elevated. What type of diagnosis do you suspect?
Bacterial Infection
Cancer
Parasitic infection
Viral Infection
A 32-year old woman visits her physician due to a month of nasal discharge, coughing and sore throat. She is diagnosed with a subtype of blood cancer resulting in uncontrolled production of abnormal agranulocytes. Erythrocyte and granulocyte counts are within normal limits and their bone marrow precursors appear normal as well. Which of the following is the most likely consequence of this patient’s condition?
Inadequate response against viral infections
Inadequate vasodilation and blood coagulation
Inadequate response against parasitic infections
Decreased blood reticulocytes
A 67-year old man visits the clinic with a 15-year history of coughing, fatigue, and headaches. Patient history reveal he worked for over 30 years as a construction worker in demolition sites known to contain asbestos. As a result of his chronic exposure to air filled with this foreign substance, the resident macrophages of the lungs, dust cells, would have phagocytosed the asbestos for years requiring constant turnover and replacement. Given this patient’s medical history, which of the following cell types would most likely be elevated in a peripheral blood smear?
Eosinophils
Lymphocytes
Thrombocytes
Monocytes
A 45-year old homeless man comes to the emergency department because of a 1-week history of pain in his right foot and a 2-day history of difficulty walking. His sock is blood-encrusted. Physical examination shows a 5-cm wound surrounded by edema on the ball of the right foot. A thick exudate containing abundant dead and dying leukocytes is expressed on palpation of the wound. Which of the following types of leukocytes most likely predominated at the wound site 1 day after the initial injury?
B lymphocytes
Monocytes
Neutrophils
Eosinophils
Which of the following cell types secretes substances that prevent blood coagulation and increase the permeability of small blood vessels to allow movement of cells from the blood into adjacent connective tissue?
Neutrophils
Fibroblasts
Mast Cells
Thrombocytes
Which of the following structures of the spleen is correctly matched with its function:
Red pulp: filtration of old and damaged RBCs
White pulp: destruction of old red blood cells.
Red pulp: antibody production
White pulp: education of T cells.
Suspected of having a rare genetic disorder, a patient and her daughter both have biopsies of their thymus. The biopsy of the thymus of the daughter shows a highly cellular thymus that contains many lymphocytes, while the maternal thymus appears less robust, with large areas of adipose tissue and numerous inclusions. What can you conclude based upon the results of this test?
Nothing, the thymus is normally very active in adults.
The mother is showing signs of abnormal tissue damage.
The daughter may be experiencing an autoimmune reaction.
Nothing, these are normal observations of pre- and post- puberty thymus samples.
Which of the following lymphatic tissues/organs is correctly matched with its function:
Spleen: Site of lymph filtration
Lymph Nodes: Reservoir of lymphocytes
Lymph Nodes: Site of blood filtration
Tonsils: Site of T-cell education
Lymphoid stem cells initially originate from the bone marrow and develop into mature T-lymphocytes in the:
Bone Marrow
Thymus
Lymph Nodes
Spleen
A 3-year-old girl from Tanzania was referred to the Hospital with severe anemia, fever, cough, pallor, weakness and tachypnea that aggravated six day ago. On abdominal examination, she had hepatosplenomegaly, and blood work revealed sickle-cells. Splenomegaly is often observed in children with sickle-cell anemia since damaged red blood cells are filtered at the spleen and removed by:
B Cells
Neutrophils
Macrophages
Hepatocytes
Filtration of abnormally shaped and old erythrocytes occurs in the absence of specific receptors because of the action of which of the following structures?
Splenic Microvasculature
Lymph Nodes
White Pulp
Thymus
This cell produces antibodies by differentiating into a plasma cell:
B lymphocyte
Basophil
Monocyte
Reticulocyte
The zona reticularis is the i. ____________ layer of the adrenal gland cortex, it contains cells that secrete ii. _______________ and whose activity is regulated by iii. ______________
i. Outermost, ii. Weak Androgens, iii.
i. Middle, ii. Aldosterone, iii. Adrenocorticotropic Hormone
i. Innermost, ii. Epinephrine, iii. Sympathetic neurons
i. Innermost, ii. Androgens, iii. Adrenocorticotropic Hormone
Cell bodies in the hypothalamus that produce oxytocin have axons that terminate at:
capillary beds in the adenohypophysis
capillary beds in the pars nervosa
capillary beds in the pars distalis
capillary beds in the hypothalamus
The basophils of the anterior pituitary:
are found only in the pars nervosa
are regulated by hypothalamic releasing and inhibiting factors
secrete hormones produced by neurons and released by axons
produce prolactin
Which statement concerning cells in the zona glomerulosa of the adrenal cortex is FALSE?
they secrete hormones classified as catecholamines
they are regulated by ACTH
they contain enzymes located in mitochondria and smooth ER involved in aldosterone synthesis
they produce mineralocorticoids urine ions and blood pressure
Which statement regarding the adrenal medulla is FALSE?
it produces norepinephrine
it is regulated by ACTH
it lies adjacent to the zona reticularis
it releases epinephrine in response to sympathetic nervous stimulation
ADH producing cells have axons that terminate at:
Capillaries present in the pars distalis.
Epithelial cells in the anterior pituitary
Capillaries present in the pars nervosa.
Endocrine cells present in the pars intermedia.
A 34-year old woman comes to the office with chronic hypertension and irregularities in urine production. She also experienced abnormal menstrual periods and hirsutism (male-pattern hair growth). Laboratory studies reveal elevated blood levels of both androgens and aldosterone, but normal cortisol levels. Which of the following histopathologic findings are most likely to be present in this patient’s adrenal glands?
Atrophy (cell death) of the zona glomerulosa and fasciculata
Hyperplasia (enlargement) of the adrenal medulla
Hyperplasia (enlargement) of the zona glomerulosa and reticularis
Hyperplasia (enlargement) of the zona fasciculata and reticularis
A 27-year old female has experienced sudden onset and unexplained weight gain with fat deposits throughout her body, most notably in her face giving rise to a more rounded appearance. She also complains of abnormal thirst and urination, loss of libido and amenorrhea (absence of menstruation) and growth of extra facial hair. Radiologic examination revealed a mass in her pituitary gland, as well as adrenal gland hyperplasia (enlargement). Given the combination of symptoms experienced by the patient, which of the following pituitary cell types is most likely affected?
Thyrotrophs
Gonadotrophs
Pineal glandular cells
Corticotrophs
A 32-year old woman comes to the office due to vision problems and frequent headaches. Brain MRI reveals a large anterior pituitary tumor compressing on the optic chiasm. Light microscopy examination of the tumor reveals hormone-secreting basophils. Which of the following processes is regulated by pituitary basophils and is most likely affected in this patient?
Stimulation of gonads including ovarian follicles
Release of stored calcium from bone
Growth of bones, muscle and adipose
Circadian rhythm and sleeping patterns
During hormone regulation, hormones are released, either directly by an endocrine gland or indirectly through the action of the hypothalamus of the brain, which stimulates other endocrine glands to release hormones in order to maintain homeostasis. Which of the following hormones is NOT secreted nor regulated by the hypothalamus?
Mineralocorticoids from zona glomerulosa
Oxytocin from neurohypophysial axons
T3/T4 hormone from follicular cells
Norepinephrine from chromaffin cells
Neuroendocrine signalling cascades that regulate cortisol secretion primarily involve coordinated activity amongst which organs?
Hypothalamus, pituitary glands, adrenal glands
Liver, pituitary glands, adrenal glands
Pituitary glands, adrenal glands, parathyroid glands
Pituitary glands, adrenal glands, thyroid glands
A 30-year old woman is diagnosed with Addison’s disease, adrenal gland insufficiency most commonly caused by autoantibodies against the adrenal cortex, without affecting chromaffin cells. Histopathological examination of an adrenal gland biopsy confirms the diagnosis by revealing atrophy (cell death) of all three cortical zones. As a result of her condition, this patient will most likely exhibit which of the following symptoms?
Abnormal cell metabolism, heat production, and sweating
Inadequate regulation of urine volume and blood pressure
Inadequate regulation of urine volume and blood pressure
Low blood calcium levels and brittle bones
A 62-year old man is brought to the office due to recurrent headaches and vomiting. Neurological examination suggests an intracranial mass located in the dorsal midbrain. These types of tumors typically arise from the pineal gland; it is therefore possible for this patient to experience circadian rhythm abnormalities. Which of the following best describes normal regulation of circadian rhythms?
Sunlight inhibits pineal cell secretion
Sunlight stimulates melatonin production
Darkness inhibits pineal cell secretion
Darkness stimulates melanin production
A drug that blocks the secretory activity of pituitary acidophilic cells would most likely:
Decrease secretion of calcitonin from the thyroid gland
Decrease secretion of growth hormone by mammotrophs
Decrease stimulation of mammary glands
Increase secretion of aldosterone by adrenal gland
A 45-year old male experiencing severe headaches visits his local hospital where radiological exams revealed a tumor in the pars distalis of his pituitary gland, but no infiltration or impingement of the pars nervosa. Given the location of the tumor, symptoms of such a condition vary widely depending on the type of cells involved. Secretion of all of the following hormones could be affected, EXCEPT:
Antidiuretic hormone
Adrenocorticotropic hormone
Growth hormone
Luteinizing hormone
Which of the following cells secrete thyroid stimulating hormone under normal conditions?
Acidophilic corticotrophs
Basophilic Thyrotrophs
Hypothalamic Basotrophs
Thyroid follicular cells
A 24-year-old male moved from Canada to Australia to attend medical school, and as expected he experienced feelings of jet-lag. One month after his flight he is still experiencing difficulty falling asleep at night time and fatigue throughout the daytime. After attending the endocrine lecture in his histology class, he self-diagnoses as having abnormal levels of melatonin. If his diagnosis is correct, this is most likely indicative of abnormal secretory activity of which of the following glands?
Adrenal Gland
Pineal Gland
Pituitary Gland
Thyroid Gland
Meiosis is a central part of the human reproductive process and guarantees some genetic variation between parents and potential siblings. The process is complex and precisely controlled in order to minimize possible mistakes. What is produced at the end of Telophase I?
Four haploid cells, chromosomes have 2 chromatids
Two diploid cells, chromosomes have 1 chromatid
Four haploid cells, chromosomes have 1 chromatid
Two haploid cells, chromosomes have 2 chromatids
A long gene is prominently expressed in pancreatic beta cells to produce one large and abundant mRNA. The protein that this mRNA should produce would be 650 amino acids long. However, when investigators use very specific tools to identify this protein for study, they are only able to detect trace amounts. Instead, they find 3 abundant proteins of 250, 143, and 97 amino acids in length. What TYPE of modification has produced these 3 unexpected proteins?
Chromatin remodeling
Regulated Nuclear RNA splicing
Genomic exon shuffling
Post translational modification
After DNA replication and immediately before entering meiosis, the n and c numbers of a germ cell are:
n=2, c=4
n=1, c=1
n=1, c=2
n=2, c=2
A common clinical presentation of Edward's Syndrome which does not occur (or rarely occurs) in Down or Patau Syndromes is:
Cardiac septal defects
Nuchal translucency
Severe facial clefting
Rocker bottom feet
Gower's maneuver (or Gower's sign) is most likely to be observed in a child with which of the following diseases?
Huntington Disease
Duchenne Muscular Dystrophy
Cystic Fibrosis
Fragile X Syndrome
Which of the following is a common clinical presentation found in Wolf-Hirschhorn Syndrome?
Cat-like crying
"Greek Warrior Helmet" facies
Polydactyly
Tall stature
Which of the following diseases has an autosomal recessive mode of inheritance?
Achondroplasia
Rett Syndrome
Beta-Thalassemia
Hemophilia B
A common clinical presentation in Cri-du-Chat Syndrome is:
Gynecomastia
"Greek Warrior Helmet" facies
High-pitched crying or mewling
Polydactyly
If a mother is a carrier of a mutant allele on an X-chromosome, what is the probability that she would pass that allele onto a son?
100%
1/2
2/3
1/4
Which of the following chromosomes is able to undergo a Robertsonian translocation?
13
19
5
10
Regarding Turner syndrome, which of the following is TRUE?
Most live-born cases have severe mental retardation
Most live-born cases have a 45,X karyotype
Most live-born cases are mosaic: 45,X / 46,XX
Most 45,X embryos survive to birth and into adulthood
What is the mode of inheritance of Rett syndrome?
X-Linked Dominant
Autosomal Recessive
Autosomal Dominant
X-Linked Recessive
The most common cause of monosomy is
Nondisjunctions during a parental meiosis
Excessive crossing-over during a parental meiosis
A defect in DNA replication
Misalignment of chromosomes during a parental meiosis
An example of an unbalanced chromosomal rearrangement is:
Pericentric inversion between 12q11 and 12p13
Duplication of 19p11
Paracentric inversion between 12q11 and 12q13
Robertsonian translocation between 13q and 21q
Below is a patient with Wolf-Hirschhorn Syndrome. Although she does not show the typical 'Greek helmet' facial appearance, she does have microcephaly, dysmorphic facies and mild mental retardation. Genetic analyses of this patient would reveal:
Robertsonian translocation between chromosome 14 and 21
Deletion of 5p
Reciprocal translocation between chromosomes 9 and 22
Deletion of 4p16
In diploid organisms, every individual carries two copies of a gene. During reproduction, one copy is passed onto each of the offspring via the gametes. This is known as Mendel's Law of:
Independent Assortment
Inheritance
Segregation
Dominance
An autosomal dominant disease is caused by a specific gene mutation, however some individuals who carry the mutation do not manifest the disease at all. This is an example of…
Incomplete Dominance
Incomplete Penetrance
Mutation
Codominance
The mode of inheritance of Marfan Syndrome is:
Autosomal Dominant
X-Linked Recessive
X-Linked Dominant
Mitochondrial
In many autosomal dominant diseases, homozygotes are more severely affected than heterozygotes. This phenomenon is known as
Variable Expressivity
Incomplete Dominance
Codominance
Incomplete Penetrance
Which of the following diseases has an autosomal recessive mode of inheritance?
Achondroplasia
Cystic Fibrosis
Fragile X syndrome
Hemophilia A
What is the mode of inheritance of Fragile X syndrome?
Autosomal Dominant
X-Linked Recessive
Autosomal Recessive
X-Linked Dominant
If testing revealed higher than normal sodium levels in the sweat of a newborn girl, which of the following diseases is most likely to be diagnosed?
Cystic Fibrosis
Duchenne Muscular Dystrophy
Huntington Disease
LHON
The mode of inheritance of Achondroplasia is.
X-Linked Dominant
X-Linked Recessive
Autosomal Dominant
Autosomal Recessive
Which of the following sequences is most likely recognized by a restriction endonuclease?
GATATC
GAGGAG
GAAAAG
AGGGGA
What is the correct name for a purine or pyrimidine base linked directly to a pentose sugar?
nucleoside
nucleotide
pyrophorin
nucleic acid
What DNA Sequence is complementary to: GCAAGTGAC
GCAAGTGAC
CGAACTCTG
CAGTGAACG
GTCACTTGC
What facilitates the coiling of the 10 nm fiber into the 30 nm fiber?
Histone 2B
Histone H1
Histone 4
topoisomerase
Which of these structures could be considered "euchromatin"?
the coiled rosette
the 30 nm fiber
the squirming coil
the coiled coil
If a sequence of DNA duplex contains 22% T, then it also contains ___ G.
66%
28%
11%
44%
What property of the core histones (H2A, H2B, H3, and H4) allow them to wrap a DNA duplex around their outer surface (the surface of the core nucleosome structure)?
polar amino acids that form hydrogen bonds with the nitrogenous bases
the exact mechanism is unknown - but appears to invoke quantum chemistry
the positive charges of the lysines and arginines int the N-terminal tails bind to the sugar-phosphate backbone
the hydrophobic pockets on the histone tails swallow up the aromatic bases
DNase I is a DNA nuclease that is commonly used to analyze chromatin structures. It is able to digest naked DNA but not DNA bound by proteins. Which part of the DNA within chromatic is digested by DNase I?
the highly repeated DNA that forms the centromere
only DNA from the accessible heterochromatin
the 146 bp DNA wrapped around the core histones
the 50-55 bp linker DNA between nucleosomes
What are the 3 basic steps in a single cycle of PCR?
Melting, reannealing & synthesis
Conversion, inversion & declination
Framing, formalization & analysis
Expansion, contraction & fermentation
Doxorubicin is a quinolone derivative that potently inhibits cell replication by interfering with DNA synthesis. This activity makes it a potent chemotherapeutic drug - most commonly used to treat leukemias and Hodgkin's Lymphoma. It is observed in cells treated with this compound that DNA synthesis begins normally, but active replication forks slowly grind to a halt and seem to be "stalled." Which of the following enzymes must this substance inhibit?
Type II Topoisomerase
DNA polymerase I
Reverse Transcriptase
DNA polymerase delta
One disadvantage for example, is that for diagnostic purposes, PCR is generally limited to amplifying sequences of:
10,000 base pairs (10 kb)
1000 base pairs (1 kb)
10 base pairs (0.01 kb)
100 base pairs (0.1 kb)
During prokaryotic DNA replication two DNA polymerases, DNA polymerase I and DNA polymerase III, play key roles in synthesis of the new DNA strands. Which of the following is an activity found in DNA polymerase I that is absent from DNA polymerase III?
5'-3' Exonuclease
3'-5' Exonuclease
Reading a DNA template in the 3' to 5' direction
5'-3' Endonuclease
In prokaryotes, during DNA replication, which enzyme synthesizes the Okazaki fragments?
Primase
Topoisomerase
DNA Polymerase III
DNA polymerase I
Cleavage of the nascent RNA from RNA Polymerase II is tightly coupled to recognition of an RNA sequence within the 3’ UTR. An enzyme among these proteins recognizing this sequence adds a poly-A tail to the RNA as soon as it comes free. What is this enzyme’s name?
Rho Helicase
U6 snRNP
Polyguanylatetransferase
Polyadenylate polymerase
What is one important feature of an eukaryotic mRNA that determines its half-life?
Length of the poly(A)-tail
Length of the 5' UTR
Total length of the mRNA
Length of the coding region
What RNA is produced by eukaryotic RNA polymerase III?
All the mRNAs
All of the tRNAs
RNA corresponding to retrotransposons
All the Micro RNAs
An important general transcription factor in eukaryotes is TBP. What is the function of TBP?
Acts as a mediator to bridge specific transcription factors with the pre-initiation complex
A helicase that terminates eukaryotic transcription
Binds directly to the TATA box to bring TFIID to the transcription start site
Recruits RNA polymerase I to rRNA gene to initiate transcription
If a cell were to become deficient in the nuclear enzyme, guanine-7-methyltransferase, what problem would result?
no caps would be put on preRNAs and no mature mRNAs would be produced or translated
the snRNPs in the spliceosome would not be able to recognize the introns
the exon junction complex proteins would not be able to find where to bind
guanosine would no longer be broken down into uric acid
What mediates the Rho-independent termination of transcription in bacteria?
Rho polymerase
Rho helicase
A RNA-polymerase associated termination factor
A GC-rich hairpin in the mRNA
What is the name for the GU site at 5’ end of an intron that is recognized by the U1 snRNP at the beginning of the RNA-splicing process?
Splice Donor Site
Exon Recognition Site
Splice Acceptor Site
Branch A Site
Crucial to the expression of protein-encoding genes in a eukaryote is the complex set of steps that must be followed in order to process an RNA transcript into a mature functional mRNA. If a mutation knocked out the splice donor site for one or more introns. What would happen?
An abnormal mRNA would result, but it would produce a normal protein.
No problems would result from such a minor glitch.
Either an exon would be skipped or an intron would be retained, resulting in a non-functional protein
A new and enlarged protein would provide new activities for the cell, and these would undoubtedly provide an advantage to the cell that would cause it to dominant others of its type.
What is the specific term used to describe proteins from different species that have extremely similar structures and identical functions?
Paralogs
Orthologs
Homologs
Psuedohomologs
Antibody proteins have among the strongest known binding properties. Which of these values would describe the binding of a very high affinity antibody to its specific antigen?
Kd = 10^(-3) M
Kd = 10^(-5) M
Ka = 10^3 M^(-1)
Kd = 10^(-12) M
Especially important in extracellular and secreted proteins such as insulin, what is the most common type of covalent bond used to stabilize a protein’s tertiary structure?
lysine-lysine bridges
cys-cys disulfide bonds
tyrosine crossbridges
Van der Waal's forces
Many proteins seem to be constructed from semi-independent modules that fold and function largely independent of the rest of the protein. These 3-D modules are termed:
Secondary structures
Paralogs
Domains
Orthologs
Myoglobin, a globular heme-protein in muscle cells, is an important oxygen carrier. This protein greatly resembles one of the subunits found in hemoglobin. In each case, the overall globular shape is achieved by using rods to enclose and cradle a central portion that holds a heme group. These bendable rods represent a very important secondary structure known as:
the alpha helix
the beta propeller
the anti-parallel beta sheet
the parallel beta sheet
What type of an amino acid is valine considered to be?
Nonpolar, aliphatic
Polar, uncharged
Negatively charged, acidic
Aromatic
Myoglobin, a globular heme-protein in muscle cells, is an important oxygen carrier. Which of the following amino acids would most likely be found in the interior of this protein?
Tryptophan
Arginine
Lysine
Histidine
Which factor causes translocation of the ribosome in eukaryotes?
eIF-2
eEF-2
EF-Tu
eEF-1
Where is the first charged initiator tRNA placed by the initiation factor during initiation of translation?
Branch A Sequence
A site
P site
I Site
Which post-translational modification acts as a signal to target a protein to be degraded by the proteasome?
tyrosine phosphorylation
polyubiquitylation of a lysine
truncation of poly-glutamate tracts
serine phosphorylation
How does puromycin work?
It binds to the small subunit and distorts its shape so that function is lost
It tricks tRNA into interacting with the wrong part of the ribosome
It binds to the P site and blocks a tRNA from sitting there
It tricks the ribosome into attaching the nascent polypeptide to it instead of a new aminoacyl-tRNA
What is the name of the “ribosome recognition site” found in many prokaryotic mRNAs?
TATA Box
Shine-Dalgarno sequence
Kozak sequence
Pribnow Box
Eukaryotic cells typically use over 50 different tRNAs. How many aminoacyl-tRNA synthetases does a cell use?
20
64
16
32
Which prokaryotic initiation factor ushers in the aminoacyl-tRNA, acts as a GTPase, and seems to position the 50S subunit onto the 30S subunit?
IF-1 -- GTP
IF-3a
IF-2 -- GTP
IF-3
What is the role of the signal sequence in precursor version of a protein?
They regulate how well the protein is made in the nucleus
They localize protein synthesis to a particular site and ensure that the protein is extruded into a specific organelle
They locate and bind the substrates for enzymes
They control how quickly biosynthesis will proceed
To what does an amino-acyl tRNA Synthetase couple its adenylated-amino acid intermediate?
the 5’-OH of the correct codon in a tRNA
the 3’-OH of the CCA 3’ extension of a tRNA with the correct anticodon
the 5’-OH of the correct anticodon in a tRNA
the 5’-OH of the CCA 3’ extension of a tRNA with the correct anticodon
What factor brings a new charged tRNA into the A site of a prokaryotic ribosome?
EF-G
eIF-1
EF-Tu
IF-2
What brings the new aminoacyl-tRNA into the A site of the eukaryotic ribosome?
eIF-1
IF-2
eEF-1
EF-Tu
Which factor causes translocation of the ribosome in prokaryotes?
EF-G
eIF-2
EF-Tu
eEF-2
Which of these is an important protein modification that specifically causes plasma proteins to become involved with the endothelial lining of blood vessels as one of the first steps in blood clotting?
tyrosine phosphorylation
gamma-carboxylation of an exposed glutamate
polyubiquitylation of a lysine
truncation of poly-glutamine tracts
If an mRNA codon reads GAU, then what is the tRNA anticodon?
AUC
UAG
CAU
GAU
Transcription Factors bind to specific DNA sequences in the regulatory regions of the genes they regulate. How do most DNA-binding proteins recognize the specific DNA sequences to which they bind?
through hydrophobic melting of the base-pairs and aromatic resonance with the stacked bases above and below the binding sequence
by hydrogen bonding or hydrophobic interaction with the part of the base-pairs that are exposed at the side of the double-helix
through establishing quantum resonance and harnessing gravity waves
thorugh ionic interaction with the phosphodiester backbone
What mediates the interaction between an activator and a basal transcription factor?
a coactivator
a histone deacetylase
an RNA polymerase
a trans-acting factor
Which of the following would occur in genomic regions that feature extensive deacetylation of histones?
Strong HAT activity
Heterochromatin
DNA hypomethylation
30nm fiber
In the regulation of the E. coli lac operon, the “operator” is …
A negative regulatory element bound by a special sigma factor protein
An origin of transcription
A negative regulatory element bound by a repressor protein
A double-hairpin stabilized by the CAP protein
In the regulation of the E. coli lac operon, the CAP protein can only bind to the CAP site when…
it is bound to allolactose
it is bound to cAMP
it is unliganded
there is lactose available
In E. coli, cAMP is a ligand for the CAP transcription factor. The CAP protein can only bind DNA when complexed with the cAMP ligand. What is the term used to describe this type of ligand?
Repressor
Corepressor
Coactivator
Inducer
Which of the following would occur in genomic regions that feature extensive acetylation of histones?
10 nm & 30nm fibers
Strong histone methylase activity
Supercoiling of loops
DNA hypermethylation
What is one possible reason for diseases caused by malfunctions of the base-excision repair mechanism?
Mutations in MSH2 or MLH1 genes
Mutations in the genes encoding the AP endonucleases
Mutations in ATM or BRACA genes
Mutations in the XP gene family
c.734_735insGT is a …
Nonsense mutation
Missense mutation
Frameshift mutation
Splicing mutation
What is the main cause for the autosomal dominant disease, hereditary nonpolyposis colorectal cancer?
Mutations in the MSH2 or MLH1 genes
Mutations in ATM
Mutations in PCNA
Mutations in MutH
A 28-month old boy presented with unsteady gait, frequent falls and spidery veins in his eyes. DNA sequencing revealed that the boy was homozygous for loss-of-function mutations in the ATM gene. The most likely diagnosis for the boy is...
Hereditary Nonpolyposis Colon Cancer
Bloom Syndrome
Ataxia Telangiectasia
Xeroderma Pigmentosum
A newborn boy delivered using forceps suffered cephalohematoma. Heavier than normal iatrogenic bleeding occurred after a heel stab to collect blood for prenatal testing, and again after an injection of vitamin K. The OBGYN who delivered the boy suspects he may have Hemophilia A even though there was no family history of the disease. Which of the following genetic tests would be most appropriate to use to detect the most common mutation causing the disease?
RFLP with Southern Blotting
RFLP with PCR
Fluorescent In-Situ Hybridization (FISH)
Comparative Genome Hybridization (CGH)
The following 6bp DNA-sequence (with blank spaces) represents a palindrome. What is the full sequence?5'-A_C_C_-3'
TGGGGT
TCGCGA
ACCCCA
AGCGCT
When we use the analogy that we have protein ships floating around butter islands on an oil sea, what is the oil?
Triglycerides
Short-chain fatty acids
A bilayer of made of phospholipids
GPI-anchored proteins
The LMNA gene encodes both lamin A and lamin C, the two crucial components of the intranuclear lining web of lamin intermediate filaments. All of the following disorders are associated with defects of lamin A/C, except:
Dilated cardiomyopathy
Emery-Dreifuss muscular dystrophy
Mucolipidosis II
Familial lipodystrophy
What portion of the nucleoplasm is devoted to producing and maturing both the snoRNPs and the snRNPs?
Gems/CBs
Sparkles
Lamin & laminosomes
Nuclear origin
All of the following statements about hereditary spherocytosis are correct, except:
It is associated with chronic liver disease
These cells are very unstable in the osmotic fragility test
It is a type of hemolytic anemia
RBCs are spheroidal and exhibit low deformability
Biological membrane feature a central structure that is a phospholipid bilayer. Glycolipids are similar, yet different, than the phospholipids. Which one of these important compounds is a glycolipid and not a phospholipid?
Phosphatidylinositol
Phosphatidylserine
Sphinogomyelin
Glucosylcerebroside
Which of the following statements is correct about membrane glycolipids?
They are classified into one of three groups: integral, peripheral or lipid-anchored
They play a role in cell-cell recognition and nerve conduction
Flippases catalyze their “flip-flop” movement from the inner and outer leaflet in the plasma membrane
Phosphatidylethanolamine is the prototype example of glycolipids
In this disease caused by a mutation in the LMNA gene, patients exhibit peripheral lipoatrophy with muscle prominence, but they accumulate adipose tissue on their faces and around their neck. What is the name of this disease?
Emery-Dreifuss muscular dystrophy
Hutchinson-Gilford Progeria Syndrome
Familial Lipodystrophy
X-linked leukopolydystrophy
When Ran GAP hydrolyzes the GTP of Ran-GTP in the cytoplasm which of the following happens next?
Ran-GDP brings Exportin back into the nucleus
Inactivated Ran-GDP releases the bound importin or exportin
Ran-GDP binds Importin or Exportin
Ran replaces GDP with GTP immediately in the cytoplasm
Vesicular trafficking is critical for intracellular function and all aspects of endocytosis, exocytosis and transcytosis. Vesicles are literally moved around the cell on microtubules by specific motor proteins. Vesicles almost miraculously deliver their cargoes to the correct location due to various molecular mechanisms that control the membrane they dock with and which membranes they can fuse with. The process of vesicle fusion is very similar throughout the cell and depends on the binding of complementary proteins. With all this in mind, when does Rab-GTP hydrolyze its GTP to GDP and become inactive?
As soon as it encounters its tether protein partner
As soon as the proper v-SNARE/t-SNARE complex is formed
As soon as the vesicle uncoats
As the vesicle begins its journey down the microtubule
How does an occupied M6P receptor interact with the clathrin coat of transport vesicles?
Through being covalently linked to clathrin
By being pushed into a clathrin mesh by a transporter protein in the membrane of secretory vesicles
Through the intermediating adaptor protein that binds to them both
By being directly loaded onto clathrin by the Golgi transporter protein
What type of lysosomal storage disease is Krabbe Disease?
Really both a sphinolipidosis and a leukodystrophy
They are considered to be Mucopolysaccharidoses
They are considered to be Leukodystrophies
They are considered to be Mucolipidoses
Which one mucopolysaccharidoses is X-linked recessive rather than autosomal recessive in its inheritance pattern?
Hurler syndrome
Hurler-Scheie syndrome
Hunter syndrome
Sly syndrome
One of the most unique features of the mitochondria is the electron transport chain. All of the following are transmembrane enzymatic proteins that span the inner mitochondria membrane, except:
Succinate dehydrogenase (Complex II)
Cytochrome b-c1 complex (Complex III)
ATP Synthase
NADH dehydrogenase (Complex I)
AZT (aka Zidovudine) is an antiretroviral drug used in HIV therapy. It acts as an inhibitor of the viral reverse transcriptase. It has many negative side-effects including headaches, fever, and nausea, liver and muscle damage and lactic acidosis. Which of the following actions of AZT explains the side-effects?
blocks the TOM/TIM translocase complex
inhibits DNA polymerase γ (gamma)
inhibits DNA polymerase δ (delta)
inhibits the Twinkle helicase
A 17-year-old female presents with progressively worsening myoclonic seizures. A biopsy of her skeletal muscle reveals ragged red fibres and crystalline mitochondrial inclusions. Her physician suspects her condition is caused by a mitochondrial DNA mutation. Which mutation is most likely?
A large deletion of the mtDNA spanning many genes
Missense mutation in the coding sequence of ATP Synthase subunits
mutations in the mitochondrial tRNA for lysine
Missense mutation in the coding sequence of NADH hydrogenase subunits
A 5-year-old boy presents with a blistering skin condition. The pediatrician diagnoses his condition as epidermolysis bullosa simplex after genetic analysis reveals a mutation in a gene that most likely encodes which group of proteins?
Keratin Intermediate filaments
Keratin Microfilaments
Kinesin motor proteins
Intermediate Microtubules
Extracellular matrix is generally composed of a ground substance embedded with various types of proteins and protein fibers. What is the most prevalent protein constituent of all basal laminae?
Fibronectin
Lamin
Laminin
Albumen
If your immune system attacks desmosomal cadherins (such as desmoglein or desmocollin) and destroys an area of desmosomes, cells in areas such as the epidermis become only weakly linked together. The epidermal cells sometimes come apart simply from friction or mild stress. The problems progress with age. What disease condition often develops by middle-age?
Junctional epidermolysis bullosa
Pemphigoid vulgaris
Dystrophic epidermolysis bullose
Epidermolysis bullosa simplex
Your patient clearly has a severe disease where the skin literally seems to fall off certain parts of their body, particularly the hands and feet. Other parts of the body show subbasilar blisters. Two fingers and two toes are webbed together. You and your colleagues diagnose the patient with Dystrophic Epidermolysis Bullosa. What is the cause of this terrible disease?
Mutations in Collagen III in the dermis
Mutations in Collagen IV of the basal lamina
Mutations in the collagen VII anchoring fibrils of the papillary dermis
Mutations in Keratin 5 or 14
A patient presents with hyperextendible skin and joint hypermobility. This is most likely the result of a defect in which of the following proteins?
Collagen type VII
Collagen type V or I
Collagen type IV
Fibrillin
Which of the following glycosaminoglycans forms the longest repeating disaccharide chains and does not covalently attach with core proteins to form proteoglycans?
Chondritin sulfate
Keratin sulfate
Hyaluronan
Heparin sulfate
The main difference between phase 2 and phase 3 in drug development is
Preclinical testing
IND filing
NDA filing
Number of subjects
What does DAG do?
DAG acts as an anchor in the membrane and prevents PLC from traveling too far
DAG actually binds to protein kinase C (PKC) noncovalently to help activate it
DAG travels to the SER and releases calcium ions into the cytosol
DAG open the nuclear pore complex to release rapid distribution RNAs
How is Protein kinase C (PKC) activated?
Phosphatidyl-4,5-bisphosphate & IP3 bind to the protein to shift its conformation into an active state
DAG & IP3 bind noncovalently to the protein to bring it to an active state
Both DAG & Ca2+ bind noncovalently to the protein and shift its conformation into the active state
IP3 & Gi bind noncovalently to the protein to bring it to an active state
A 6-month-old infant who is failing to thrive is brought to your clinic. Tests reveal hepatosplenomegaly, muscle weakness and atrophy, hypotonia, and decreased deep tendon reflexes. Blood tests reveal that the infant has normal glucose levels. Biopsy of the liver reveals initial stages of cirrhosis due to the accumulation of an abnormal glycogen with few branch points whose structure resembles amylopectin. The clinical and laboratory results presented are indicative of which GSD?
Andersen disease (type IV glycogen storage disease)
McArdle disease (type V glycogen storage disease)
Von Gierke disease (type I glycogen storage disease)
Cori or Forbes disease (type III glycogen storage disease)
You are studying the effects of a new drug on the activity of your favorite enzyme. The results of your assays indicate that the drug acts as a noncompetitive inhibitor. Which of the following changes to the Km and Vmax allowed that determination to be made regarding the drugs actions?
Km decreased, Vmax unchanged
Km unchanged, Vmax unchanged
Km increased, Vmax decreased
Km unchanged, Vmax decreased
Regulation of glycogen metabolism is tightly controlled at the level of the activity of glycogen phosphorylase. Which of the following is known to act as a negative effector of glycogen phosphorylase?
Protein kinase A
Glucose 6-phosphate
Ca2+
AMP
Which of the following intermediates of TCA cycle can be directly converted to phosphoenolpyruvate to trigger the pathway of gluconeogenesis?
Pyruvate
α-ketoglutarate
Oxaloacetate
Succinate
A 5-week-old girl, who appeared to be healthy at birth, develops vomiting a few days after birth. The baby was exclusively breast fed and no processed food was given. Your current examination reveals that she has hepatomegaly, jaundice, and early cataract formation and is not meeting developmental milestones. You suspect that she has which of the following conditions?
Hereditary fructose intolerance
Pyruvate carboxylase deficiency
Galactosemia
Hurler syndrome
Which of the following vitamins is needed for the synthesis of a cofactor required for the conversion of succinate to fumarate?
Riboflavin (B2)
Lipoic acid
Pantothenic acid (B5)
Thiamine (B1)
The maximum capacity of the liver to carry out gluconeogenesis during starvation depends upon which of the following?
Activation of glucose 6-phosphatase by insulin
Induction of PEP carboxykinase synthesis by glucagon
Inhibition of glucokinase by AMP
Activation of pyruvate kinase by insulin
Treatment of maple syrup urine disease involves the dietary restriction of which amino acid(s)?
Phenylalanine
Isoleucine, Leucine and Asparagine
Asparagine and Phenylalanine
Isoleucine, Leucine and Valine
Which of the following mutations would be most likely to cause Type II Osteogenesis Imperfecta?
c.376T>A in the COL2A1 gene
p.G346D in the proα1(I) protein
c.653-654delAC in the COL1A2 gene
p.G163D in the proα1(I) protein
Loss-of-function mutations in the _____ gene are associated with campomelic dysplasia.
SRY
SOX9
LCT
SHH
Which of the following describes DiGeorge Syndrome?
22q11 deletion
t(9:22)
11q22 deletion
t(11:22)
A study found 400 peoplewith heart failure had a mean serum cholesterol of 230 mg/dl with a standard deviation of 15mg/dl/ What is the best estimate of how many people in this study had a serum cholesterol <200 mg/dl?
50
20
10
5
Embryologicallly, the inner lining ad outer wall of the lung consist of which of the following?
Endoderm only
Endoderm and visceral lateral plate mesoderm
Neural crest cells
Parietal lateral plate mesoderm
A researcher is trying to determine if going to a tanning salon increases risk of skin related cancer. She enrolls 100 women whi regularly plan on going to a tanning salon at least twice a week throughout the upcoming year and 100 women who do not plan to use any tanning methods. What type of study is this?
Cross Sectional
Case Series
Case-Control
Cohort
What structure/chemicals are most responsible for the overall negative charge on the outer cell membrane of healthy cells?
Peripheral proteins expressing serine
Bilayer fatty acid chains
Sialic acid sugars
Phosphatidylserine
A study compared new criteria for diagnosing gout to crystals found in the joint fluid (gold standard). 400 patients were evaluated with the new criteria and 60% had gout according to the gold standard. The sensitivity of the new criteria was 75% and the specificity was 95%. Which is the closest to the positive predictive value?
95%
4%
28%
72%
